Index

_

__array_prepare__() (nsim.nsim.DistTimeseries method) __distob_scatter__() (nsim.timeseries.Timeseries method) __getitem__() (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

__reduce__() (nsim.timeseries.Timeseries method) __setstate__() (nsim.timeseries.Timeseries method)

A

abs() (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) absolute() (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) add_analyses() (nsim.nsim.DistTimeseries class method) (nsim.timeseries.Timeseries class method) (nsim.timeseries.Timeseries method) angle() (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) ap_entropy() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

argmax() (nsim.timeseries.Timeseries method) argmin() (nsim.timeseries.Timeseries method) autocorrelation() (in module nsim.analyses1) (in module nsim.analyses1.misc) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) average_timestep_used_by_jr (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

B

bandpass() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

bin_power() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

C

circmean() (in module nsim.analyses1) (in module nsim.analyses1.phase) (in module nsim.analysesN) (in module nsim.analysesN.phase) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) circstd() (in module nsim.analyses1) (in module nsim.analyses1.phase) (in module nsim.analysesN) (in module nsim.analysesN.phase) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) compute() (nsim.nsim.Simulation method) concatenate() (nsim.timeseries.Timeseries method)

crossing_indices() (in module nsim.analyses1) (in module nsim.analyses1.misc) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) cwt() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) cwt_distributed() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

D

DelaySDEModel (class in nsim.nsim) dfa() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

dimension (nsim.models.basic_sde.OU attribute) (nsim.models.JansenRit attribute) (nsim.models.OU attribute) (nsim.models.Oscillator attribute) (nsim.models.neural_mass.JansenRit attribute) (nsim.models.oscillators.Oscillator attribute) (nsim.nsim.ODEModel attribute), [1] (nsim.nsim.SDEModel attribute), [1] DistTimeseries (class in nsim.nsim)

E

e0 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) embed_seq() (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) epochs() (in module nsim.analyses1), [1] (in module nsim.analyses1.epochs) (in module nsim.analysesN) (in module nsim.analysesN.epochs) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) epochs_distributed() (in module nsim.analyses1), [1] (in module nsim.analyses1.epochs) (in module nsim.analysesN) (in module nsim.analysesN.epochs) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

epochs_joint() (in module nsim.analyses1), [1] (in module nsim.analyses1.epochs) (in module nsim.analysesN) (in module nsim.analysesN.epochs) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) epsilon (nsim.models.Oscillator1D attribute) (nsim.models.oscillators.Oscillator1D attribute) Error, [1] expand_dims() (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

F

f (nsim.nsim.ODEModel attribute) (nsim.nsim.SDEModel attribute) f() (nsim.models.basic_sde.OU method) (nsim.models.JansenRit method) (nsim.models.OU method) (nsim.models.Oscillator method) (nsim.models.Oscillator1D method) (nsim.models.neural_mass.JansenRit method) (nsim.models.oscillators.Oscillator method) (nsim.models.oscillators.Oscillator1D method) (nsim.nsim.ODEModel method) (nsim.nsim.SDEModel method) first_return_times() (in module nsim.analyses1) (in module nsim.analyses1.misc) (in module nsim.analysesN) (in module nsim.analysesN.misc) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

fisher_info() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) flatten() (nsim.timeseries.Timeseries method)

G

G (nsim.nsim.SDEModel attribute) G() (nsim.models.basic_sde.OU method) (nsim.models.JansenRit method) (nsim.models.OU method) (nsim.models.Oscillator method) (nsim.models.Oscillator1D method) (nsim.models.neural_mass.JansenRit method) (nsim.models.oscillators.Oscillator method) (nsim.models.oscillators.Oscillator1D method) (nsim.nsim.SDEModel method) g1 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

g2 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) g3 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) g4 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

H

He1 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) He2 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) He3 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) hfd() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) Hi (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) highpass() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

hilbert() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) hilbert_amplitude() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) hilbert_phase() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) hjorth() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) hurst() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

I

in_range() (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) information_based_similarity() (in module nsim.analyses1.pyeeg)

integrate() (nsim.nsim.Model method) (nsim.nsim.ODEModel method) (nsim.nsim.SDEModel method)

J

JansenRit (class in nsim.models) (class in nsim.models.neural_mass)

K

ke1 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) ke2 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

ke3 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) ki (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

L

labels (nsim.timeseries.Timeseries attribute) lam (nsim.models.basic_sde.OU attribute) (nsim.models.OU attribute) (nsim.models.Oscillator attribute) (nsim.models.oscillators.Oscillator attribute)

lowpass() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

M

max() (nsim.timeseries.Timeseries method) mean() (nsim.timeseries.Timeseries method) merge() (in module nsim.timeseries) (nsim.timeseries.Timeseries method) min() (nsim.timeseries.Timeseries method)

mod2pi() (in module nsim.analyses1) (in module nsim.analyses1.phase) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) Model (class in nsim.nsim) modelclass (nsim.nsim.RepeatedSim attribute) MultipleSim (class in nsim.nsim)

N

NetworkSim (class in nsim.nsim) newmodel() (in module nsim.nsim) newsim() (in module nsim.nsim) notch() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) nsim (module) nsim.analyses1 (module) nsim.analyses1.epochs (module) nsim.analyses1.freq (module) nsim.analyses1.misc (module) nsim.analyses1.phase (module) nsim.analyses1.plots (module) nsim.analyses1.pyeeg (module) nsim.analysesN (module)

nsim.analysesN.epochs (module) nsim.analysesN.misc (module) nsim.analysesN.phase (module) nsim.analysesN.plots (module) nsim.models (module) nsim.models.basic_sde (module) nsim.models.neural_mass (module) nsim.models.oscillators (module) nsim.nsim (module) nsim.readfile (module) nsim.sde (module) nsim.timeseries (module)

O

ODEModel (class in nsim.nsim) omega (nsim.models.Oscillator attribute) (nsim.models.oscillators.Oscillator attribute) Oscillator (class in nsim.models) (class in nsim.models.oscillators) Oscillator1D (class in nsim.models) (class in nsim.models.oscillators)

OU (class in nsim.models) (class in nsim.models.basic_sde) output (nsim.nsim.MultipleSim attribute), [1] (nsim.nsim.RepeatedSim attribute) (nsim.nsim.Simulation attribute), [1] output_vars (nsim.models.basic_sde.OU attribute) (nsim.models.JansenRit attribute) (nsim.models.OU attribute) (nsim.models.Oscillator attribute) (nsim.models.neural_mass.JansenRit attribute) (nsim.models.oscillators.Oscillator attribute) (nsim.nsim.ODEModel attribute), [1] (nsim.nsim.SDEModel attribute), [1]

P

p_mean (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) p_sdev (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) ParameterSim (class in nsim.nsim) periods() (in module nsim.analyses1) (in module nsim.analyses1.phase) (in module nsim.analysesN) (in module nsim.analysesN.phase) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) permutation_entropy() (in module nsim.analyses1.pyeeg) pfd() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

phase_crossings() (in module nsim.analyses1) (in module nsim.analyses1.phase) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) phase_histogram() (in module nsim.analysesN) (in module nsim.analysesN.plots) (nsim.nsim.DistTimeseries method) plot() (in module nsim.analyses1) (in module nsim.analyses1.plots) (in module nsim.analysesN) (in module nsim.analysesN.plots) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) psd() (in module nsim.analyses1) (in module nsim.analyses1.freq) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) ptp() (nsim.timeseries.Timeseries method)

R

ravel() (nsim.timeseries.Timeseries method) RepeatedSim (class in nsim.nsim) reshape() (nsim.timeseries.Timeseries method)

rho1 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute) rho2 (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

S

S() (nsim.models.JansenRit method) (nsim.models.neural_mass.JansenRit method) samp_entropy() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) SDEModel (class in nsim.nsim) SDEValueError sigma (nsim.models.basic_sde.OU attribute) (nsim.models.OU attribute) (nsim.models.Oscillator1D attribute) (nsim.models.oscillators.Oscillator1D attribute) sigma1 (nsim.models.Oscillator attribute) (nsim.models.oscillators.Oscillator attribute) sigma2 (nsim.models.Oscillator attribute) (nsim.models.oscillators.Oscillator attribute) SimTypeError Simulation (class in nsim.nsim)

SimValueError sodeint() (in module nsim.sde) spectral_entropy() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) split() (nsim.timeseries.Timeseries method) std() (nsim.timeseries.Timeseries method) svd_entropy() (in module nsim.analyses1) (in module nsim.analyses1.pyeeg) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method) swapaxes() (nsim.timeseries.Timeseries method) system (nsim.nsim.Simulation attribute)

T

t (nsim.timeseries.Timeseries attribute) Timeseries (class in nsim.timeseries) timeseries (nsim.nsim.MultipleSim attribute), [1] (nsim.nsim.RepeatedSim attribute) (nsim.nsim.Simulation attribute), [1] timeseries_from_file() (in module nsim.readfile)

timeseries_from_mat() (in module nsim.readfile) transpose() (nsim.timeseries.Timeseries method) tspan (nsim.nsim.Simulation attribute) (nsim.timeseries.Timeseries attribute)

U

u_mean (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

u_sdev (nsim.models.JansenRit attribute) (nsim.models.neural_mass.JansenRit attribute)

V

var() (nsim.timeseries.Timeseries method)

variability_fp() (in module nsim.analyses1), [1] (in module nsim.analyses1.epochs) (in module nsim.analysesN) (in module nsim.analysesN.epochs) (nsim.nsim.DistTimeseries method) (nsim.timeseries.Timeseries method)

Y

y0 (nsim.models.basic_sde.OU attribute) (nsim.models.JansenRit attribute) (nsim.models.OU attribute) (nsim.models.Oscillator attribute) (nsim.models.Oscillator1D attribute) (nsim.models.neural_mass.JansenRit attribute) (nsim.models.oscillators.Oscillator attribute) (nsim.models.oscillators.Oscillator1D attribute)